From d98cef948ea7b4241795049d5504226badc9b629 Mon Sep 17 00:00:00 2001 From: AngryMaciek Date: Mon, 22 Jul 2024 20:38:20 +0200 Subject: [PATCH] nb --- notebook.ipynb | 28 ++++++---------------------- 1 file changed, 6 insertions(+), 22 deletions(-) diff --git a/notebook.ipynb b/notebook.ipynb index 66f0438..5f18cc9 100644 --- a/notebook.ipynb +++ b/notebook.ipynb @@ -52,7 +52,7 @@ "id": "63403efe", "metadata": {}, "source": [ - "Compile _demon_" + "Compile _demon_ (skip this step unless you use MyBinder service for notebook exploration)" ] }, { @@ -133,28 +133,12 @@ "--cores 3" ] }, - { - "cell_type": "markdown", - "id": "b6b91cc3", - "metadata": {}, - "source": [ - "## Example post-processing" - ] - }, - { - "cell_type": "markdown", - "id": "90a8045e", - "metadata": {}, - "source": [ - "In order to quickly glance over simulations' results we shall utilize a [previously developed package](https://github.com/robjohnnoble/demonanalysis) (which is outside the scope if this repository)." - ] - }, { "cell_type": "markdown", "id": "7317904e", "metadata": {}, "source": [ - "### Inspect the summary plots:" + "## Inspect summary plots:" ] }, { @@ -172,7 +156,7 @@ "metadata": {}, "outputs": [], "source": [ - "Image(filename=\"tests/binder/output/simulations/00000000/summary.png\") " + "Image(filename=\"tests/binder/output/analyses/00000000/muller.png\") " ] }, { @@ -190,7 +174,7 @@ "metadata": {}, "outputs": [], "source": [ - "Image(filename=\"tests/binder/output/simulations/00000001/summary.png\") " + "Image(filename=\"tests/binder/output/analyses/00000001/muller.png\") " ] }, { @@ -208,7 +192,7 @@ "metadata": {}, "outputs": [], "source": [ - "Image(filename=\"tests/binder/output/simulations/00000002/summary.png\") " + "Image(filename=\"tests/binder/output/analyses/00000002/muller.png\") " ] }, { @@ -216,7 +200,7 @@ "id": "dfdd7551", "metadata": {}, "source": [ - "**The simple example above highlights that the higher the deme carrying capacity is the sooner the tumor evolves within the population.**" + "**The simple example above highlights that the higher the deme carrying capacity is the easier the tumor evolves within the population.**" ] }, {