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<!DOCTYPE html>
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<title>Watson Lab Behavioral Box : Neuroscope</title>
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Watson Lab Behavioral Box : Neuroscope
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Created by <span class='author'> Pho Hale</span>, last modified on Jul 21, 2020
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<p>Link: <a href="https://drive.google.com/file/d/1h8DtnAu7VusyrADECoao8xUeoZSweCC9/view?usp=sharing" class="external-link" rel="nofollow">https://drive.google.com/file/d/1h8DtnAu7VusyrADECoao8xUeoZSweCC9/view?usp=sharing</a></p><p>Platform: Cross-platform</p><p>Prerequisites: C++, QT, K-Lite_Codec_Pack_1488_Basic.exe</p><p>Components:</p><p>neuroscope</p><p>libneurosuite</p><p><br/></p></div>
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<p>Displays an interactive timeline depicting EPHYS events, and can display a synchronized video.</p><p><br/></p><p>Get the latest binary from the Google Drive /</p><p><a href="https://drive.google.com/file/d/1h8DtnAu7VusyrADECoao8xUeoZSweCC9/view?usp=sharing" class="external-link" rel="nofollow">https://drive.google.com/file/d/1h8DtnAu7VusyrADECoao8xUeoZSweCC9/view?usp=sharing</a></p></div>
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<h2 class="auto-cursor-target" id="Neuroscope-Screenshots:">Screenshots:</h2><p class="auto-cursor-target"><span class="confluence-embedded-file-wrapper confluence-embedded-manual-size"><img class="confluence-embedded-image confluence-thumbnail" height="250" src="attachments/161186214/161186222.png" data-image-src="attachments/161186214/161186222.png" data-unresolved-comment-count="0" data-linked-resource-id="161186222" data-linked-resource-version="1" data-linked-resource-type="attachment" data-linked-resource-default-alias="VideoPlayer.PNG" data-base-url="https://wiki.med.umich.edu" data-linked-resource-content-type="image/png" data-linked-resource-container-id="161186214" data-linked-resource-container-version="2"></span><span class="confluence-embedded-file-wrapper confluence-embedded-manual-size"><img class="confluence-embedded-image" height="250" src="attachments/161186214/161186223.png" data-image-src="attachments/161186214/161186223.png" data-unresolved-comment-count="0" data-linked-resource-id="161186223" data-linked-resource-version="1" data-linked-resource-type="attachment" data-linked-resource-default-alias="VideoMenu.PNG" data-base-url="https://wiki.med.umich.edu" data-linked-resource-content-type="image/png" data-linked-resource-container-id="161186214" data-linked-resource-container-version="2"></span><span class="confluence-embedded-file-wrapper confluence-embedded-manual-size"><img class="confluence-embedded-image" height="250" src="attachments/161186214/161186224.png" data-image-src="attachments/161186214/161186224.png" data-unresolved-comment-count="0" data-linked-resource-id="161186224" data-linked-resource-version="1" data-linked-resource-type="attachment" data-linked-resource-default-alias="DataWindow.PNG" data-base-url="https://wiki.med.umich.edu" data-linked-resource-content-type="image/png" data-linked-resource-container-id="161186214" data-linked-resource-container-version="2"></span></p><div class="sectionMacroWithBorder"><div class="sectionMacroRow"><h1 id="Neuroscope-End-User:">End-User:</h1><h2 id="Neuroscope-InstallingUnderWindows:">Installing Under Windows:</h2><p>1. Required Video Codecs:<br/>Install K-Lite_Codec_Pack_1488_Basic.exe:<br/>The default options work fine, but you can check other codecs to enable support for more types of videos.</p><p>2. Neuroscope:<br/>Remove any old versions of neuroscope prior to running the installer.<br/>Run "neuroscope-2.1.1-win64.exe" and install to the default directory.</p><p><br/></p><h2 id="Neuroscope-UsingtheVideoFeatures:">Using the Video Features:</h2><p>0. Ensure that you have opened a .dat data file as usual.<br/>1. Click the "Video" Menu at the top of the screen and select "Link Video"<br/>- There is also a shortcut in the toolbar on the left side of the screen.<br/>2. Select the video that corresponds to the currently opened data file.<br/>- The data and video files must have been created on the same day.<br/>3. The video player window opens and the video is displayed.</p><h2 id="Neuroscope-Features:">Features:</h2><p>The video window's playback position is automatically synchronized to the position in the main data window.<br/>- Dragging the scroll bar at the bottom of the data window moves the video's playback position to the corresponding position.<br/>- Manually entering a "Start time" in the data window moves the video's playback position to the corresponding position.<br/>- Manually adjusting the video's playback position updates the data window's "Start time" as well (the sync is bidirectional).</p><p>The left and right arrows near the bottom of the video window allow you to jump backward and forward in time along the duration of the video.<br/>The text field at the bottom of the video player allows you to enter a custom jump duration (in seconds). Fractional seconds (e.g. 2.5) are allowed.</p><p>The play button allows you to playback the video at the recorded speed. This playback does NOT update the data window's "Start time" (the synchronization is temporarily disabled).</p><h2 id="Neuroscope-Notes:"><br/>Notes:</h2><p>The temporal offset between the video and data windows is determined by the file/directory names of the opened files. The following conventions are expected:<br/>Data Folder Naming: Jasper_190319_125141<br/>{NAME}_{YYMMDD}_{HHmmss}</p><p>Video Naming: Jasper_20190319_125207822.avi<br/>{NAME}_{YYYYMMDD}_{HHmmssSSS}.avi</p></div></div><p><br/></p><p>Development:</p><div class="sectionMacroWithBorder"><div class="sectionMacroRow"><h1 id="Neuroscope-Development">Development</h1><p><span style="font-size: 20.0px;letter-spacing: -0.008em;">Releasing under windows:</span></p><p>1. build the release directory<br/>2. open a new admin cmd.exe prompt and cd to the release directory<br/>3. windeployqt.exe neuroscope.exe</p><h2 id="Neuroscope-OtherInfo:">Other Info:</h2><p>C:\Users\watsonlab\Documents\code\libneurosuite\build\cmake</p><p>DEBUG:<br/>C:\Users\watsonlab\Documents\code\libneurosuite\build\OUTPUT\libneurosuite-2.0.0-Windows-AMD64-DEBUG\libneurosuite-2.0.0-Windows-AMD64\CMake</p><p>RELEASE:<br/>C:\Users\watsonlab\Documents\code\libneurosuite\build\OUTPUT\libneurosuite-2.0.0-Windows-AMD64-RELEASE\libneurosuite-2.0.0-Windows-AMD64\CMake</p><p>C:\Program Files\neurosuite</p><p><br/></p><p style="margin-left: 0.0px;"><br/></p></div></div><p><br/></p><p><br/></p></div>
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<p>Document generated by Confluence on Mar 24, 2022 11:12</p>
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