tests.tex

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% Arsclassica Article
% LaTeX Template
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% This template has been downloaded from:
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% Original author:
% Lorenzo Pantieri (http://www.lorenzopantieri.net) with extensive modifications by:
% Vel (vel@latextemplates.com)
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% License:
% CC BY-NC-SA 3.0 (http://creativecommons.org/licenses/by-nc-sa/3.0/)
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%	PACKAGES AND OTHER DOCUMENT CONFIGURATIONS
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\documentclass[
10pt, % Main document font size
a4paper, % Paper type, use 'letterpaper' for US Letter paper
oneside, % One page layout (no page indentation)
%twoside, % Two page layout (page indentation for binding and different headers)
headinclude,footinclude, % Extra spacing for the header and footer
BCOR5mm, % Binding correction
]{scrartcl}

\input{doc/structure.tex} % Include the structure.tex file which specified the document structure and layout

\hyphenation{Fortran hy-phen-ation OpenCMISSLocalConfig} % Specify custom hyphenation points in words with dashes where you would like hyphenation to occur, or alternatively, don't put any dashes in a word to stop hyphenation altogether

\usepackage{datetime}
\usepackage{rotating}
\usepackage{verbatim}
\usepackage{media9}    % for movies

\newcommand\highlightcolor{black}
\newcommand\opencmiss{\textit{OpenCMISS}}
\newcommand\dependencies{\textit{OpenCMISS-{\color{\highlightcolor}dependencies}}}
\newcommand\iron{\textit{OpenCMISS-{\color{\highlightcolor}iron}}}
\newcommand\zinc{\textit{OpenCMISS-{\color{\highlightcolor}zinc}}}
\newcommand\example{\textit{example}}
\newcommand\examples{\textit{OpenCMISS-{\color{\highlightcolor}examples}}}
\newcommand\myexamples{\textit{myOpenCMISS-examples}}
\newcommand\debug{\textit{{\color{\highlightcolor}debug}}}
\newcommand\release{\textit{{\color{\highlightcolor}release}}}
\newcommand\totalview{\textit{TotalView}}
\newcommand\git{\textit{git}}
\newcommand\github{\textit{GitHub}}
\newcommand\lead{\textit{LEAD}}
\newcommand{\at}{\makeatletter @\makeatother}

%----------------------------------------------------------------------------------------
%	TITLE AND AUTHOR(S)
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\title{\normalfont{\iron\ examples and tests used by \opencmiss\ developers at University of Stuttgart, Germany}} % The article title

%\author{\spacedlowsmallcaps{Andreas Hessenthaler* \& James Smith\textsuperscript{1}}} % The article author(s) - author affiliations need to be specified in the AUTHOR AFFILIATIONS block

\author{% NOTE : Surnames in alphabetical order
Christian Bleiler\footnote{Institute of Applied Mechanics (CE), University of Stuttgart, Pfaffenwaldring 7, 70569 Stuttgart, Germany},
Dr.-Ing.\ Nehzat Emamy\footnote{Institute for Parallel and Distributed Systems, University of Stuttgart, Universit\"atsstra\ss e 38, 70569 Stuttgart, Germany},\\
Andreas Hessenthaler\footnotemark[1],
Thomas Klotz\footnotemark[1],\\
Aaron Kr\"amer\footnote{Lehrstuhl Mathematische Methoden f\"ur komplexe Simulation der Naturwissenschaft und Technik, University of Stuttgart, Allmandring 5b, 70569 Stuttgart, Germany},
Benjamin Maier\footnotemark[2],
Sergio Morales\footnotemark[1],\\
Mylena Mordhorst\footnotemark[1],
Harry Saini\footnotemark[1]        
}

\usdate
\date{\color{gray}\large \today \\ \currenttime} % An optional date to appear under the author(s)
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\begin{document}
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%	HEADERS
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\renewcommand{\sectionmark}[1]{\markright{\spacedlowsmallcaps{#1}}} % The header for all pages (oneside) or for even pages (twoside)
%\renewcommand{\subsectionmark}[1]{\markright{\thesubsection~#1}} % Uncomment when using the twoside option - this modifies the header on odd pages
\lehead{\mbox{\llap{\small\thepage\kern1em\color{halfgray} \vline}\color{halfgray}\hspace{0.5em}\rightmark\hfil}} % The header style
\pagestyle{scrheadings} % Enable the headers specified in this block
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%	TABLE OF CONTENTS & LISTS OF FIGURES AND TABLES
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\maketitle                  % Print the title/author/date block
\setcounter{tocdepth}{3}    % Set the depth of the table of contents
                            % to show sections and subsections only
\tableofcontents            % Print the table of contents
\listoffigures              % Print the list of figures
\listoftables               % Print the list of tables

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%	TEST SUMMARY
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\clearpage
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\section{Test summary}
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\verbatiminput{results.summary}
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\subsection{Details}
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\verbatiminput{failed.tests}
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%===============================================================================
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%	INTRODUCTION
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\clearpage
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\input{doc/intro}
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%	PROGRESS
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\input{doc/progress}
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%===============================================================================
%===============================================================================
%	Examples
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\clearpage
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\section{Diffusion equation}
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\subsection{Equation in general form}
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The governing equation is,
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\begin{equation}
    \partial_t u + \nabla \cdot [\boldsymbol{\sigma} \nabla u] = f,
\end{equation}
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with conductivity tensor $\boldsymbol{\sigma}$. The conductivity tensor is,
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\begin{itemize}
    \item{defined in material coordinates (fibre direction),}
    \item{diagonal,}
    \item{defined per element.}
\end{itemize}
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\input{examples/example-0001/doc/example}
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\input{examples/example-0001-u/doc/example}
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\input{examples/example-0002/doc/example}
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\input{examples/example-0003/doc/example}
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\input{examples/example-0004/doc/example}
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%\input{examples/example-0002-b/doc/example}
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\input{examples/example-0005/doc/example}
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\input{examples/example-0011/doc/example}
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\input{examples/example-0012/doc/example}
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\input{examples/example-0013/doc/example}
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%===============================================================================
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\clearpage
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\section{Linear elasticity}
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\subsection{Equation in general form}
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\begin{equation}
    \partial_{tt} \boldsymbol{u} + \nabla \cdot \boldsymbol{\sigma} (\boldsymbol{u}, t) = \boldsymbol{f} (\boldsymbol{u}, t)
\end{equation}
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\input{examples/example-0101/doc/example}
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\input{examples/example-0102/doc/example}
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\input{examples/example-0111/doc/example}
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\input{examples/example-0112/doc/example}
%===============================================================================
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\clearpage
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\section{Finite elasticity}
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\input{examples/example-0201-u/doc/example} % uniaxial test, isotropic & anisotropic Neo-Hooke
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%\input{examples/example-0202-u/doc/example} % shear test, isotropic & anisotropic Neo-Hooke
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%\input{examples/example-0203-u/doc/example} % cube with activation
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\input{examples/example-0204-u/doc/example} % TA with stretch
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%===============================================================================
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\clearpage
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\section{Navier-Stokes flow}
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\subsection{Equation in general form}
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\begin{equation}
    \partial_{t} (\rho \boldsymbol{v}) + \nabla \cdot (\rho \boldsymbol{v} \otimes \boldsymbol{v} + p \boldsymbol{I}) = \rho \boldsymbol{f}
\end{equation}
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%\input{examples/example-0301/doc/example}
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\input{examples/example-0302-u/doc/example}
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%===============================================================================
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\clearpage
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\section{Monodomain}
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\input{examples/example-0401/doc/example}
\input{examples/example-0402/doc/example}
\input{examples/example-0404-c/doc/example}
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%===============================================================================
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\clearpage
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\section{CellML model}
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%\input{examples/example-0501/doc/example}
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%	BIBLIOGRAPHY
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\clearpage
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%\renewcommand{\refname}{\spacedlowsmallcaps{References}} % For modifying the bibliography heading
\bibliographystyle{unsrt}
\bibliography{doc/refs}
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\end{document}
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