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Reason for setting bias value for annoHLA.pl #39

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lidd77 opened this issue Jun 16, 2024 · 0 comments
Open

Reason for setting bias value for annoHLA.pl #39

lidd77 opened this issue Jun 16, 2024 · 0 comments

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@lidd77
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lidd77 commented Jun 16, 2024

Hello,

  I got a question  about why  you  set bias value to  "correct"  gaps open (blastn result ) . 
  $hash12{$hla} += $m + $d * $bias;

  for long reads bias is  0.4 in annoHLA.pl ,  could you tell me why set this value ?   

Best

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