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{"name":"NGS","tagline":"data analysis course","body":"NGS Data Analysis Course\r\n================================================================================\r\n\r\n### Introduction to Linux systems\r\n\r\n\r\n### Introduction to NGS technologies\r\n\r\n\r\n### Quality control for NGS raw data\r\n\r\n- [Slides](COURSE_MATERIALS/rna-seq/slides/slides.pdf) - [Practical exercise 1: fastQC](COURSE_MATERIALS/rna-seq/examples/example.html) - Practical exercise 2: cutadapt\r\n\r\n\r\n### Mapping reads to a reference genome\r\n\r\n\r\n### Visualization of NGS data\r\n\r\n- [Slides](COURSE_MATERIALS/visualization/slides/2014-Cambridge_visualisation.pdf) || [Practical exercise 1](COURSE_MATERIALS/visualization/example/010_example.html) || [Practical exercise 2](COURSE_MATERIALS/visualization/example/020_example.html)\r\n\r\n\r\n### Variant calling\r\n\r\n### Variant annotation\r\n\r\n### Association studies\r\n\r\n\r\n\r\n### RNA-Seq data processing\r\n\r\n### RNA-Seq data analysis\r\n\r\n### Functional analysis\r\n","google":"","note":"Don't delete this file! It's used internally to help with page regeneration."}