scraped names mismatch URL

[jwiggi18]

@dimus

Using the following code to scrape names from Wikipedia inconsistencies indicated with *.

library(rphylotastic)
#Alaska
#scrape names from wikipedia
names_Alaska <- url_get_scientific_names(URL = "https://en.wikipedia.org/wiki/List_of_Alaska_state_symbols")

print(names_Alaska)
*#returns list()

#Check the scientific names
Alaska_resolved_otol <- taxa_resolve_names_with_otol(taxa = names_Alaska)

print(Alaska_resolved_otol)

Alaska_resolved_gnr <- taxa_resolve_names_with_gnr(taxa = names_Alaska)

print(Alaska_resolved_gnr)

#Arizona
#scrape names from wikipedia
names_Arizona <- url_get_scientific_names(URL = "https://en.wikipedia.org/wiki/List_of_Arizona_state_symbols")

print(names_Arizona)
*#name given in URL = "Hyla eximia" rphylotastic scrapes = "Hyla"
*# "Bassariscus astutus" "Bassariscus"
*# "Oncorhynchus gilae apache" "Oncorhynchus gilae"
*# "Crotalus willardi willardi" "Crotalus willardi"

#Check the scientific names
Arizona_resolved_otol <- taxa_resolve_names_with_otol(taxa = names_Arizona)

print(Arizona_resolved_otol)
*#removed Harpagornis incendei (the cacuts wren) and kept Peoria and Maricopa (county in *Arizona, also a genus of moth)

Arizona_resolved_gnr <- taxa_resolve_names_with_gnr(taxa = names_Arizona)

print(Arizona_resolved_gnr)
*#scraped list = "Harpagornis incendei" gnr = "Harpagornis"
*#kept Peoria and Maricopa

#Arkansas
#scrape names from wikipedia
names_Arkansas <- url_get_scientific_names(URL = "https://en.wikipedia.org/wiki/List_of_Arkansas_state_symbols")

print(names_Arkansas)
*#Populus = part of state motto
*#Ouachita = state region

#Check the scientific names
Arkansas_resolved_otol <- taxa_resolve_names_with_otol(taxa = names_Arkansas)

print(Arkansas_resolved_otol)
*#prints "Apis mellifera" Vitis aestivalis" "Pyrus malus" multiple times
*#keeps Populus
*#eliminates Ouachita

Arkansas_resolved_gnr <- taxa_resolve_names_with_gnr(taxa = names_Arkansas)

print(Arkansas_resolved_gnr)
*#keeps Populus
*#eliminates Ouachita