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In rare cases (i.e. large proteins) the engine runs out of memory. As I need it to be DVI file I understand I need to use latex engine. I've been trying to increase memory by changing the engine_args value to
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Dear TinyTex people,
I've recently been using to vizualize a protein structure from TEX to a .DVI file. The command I use is as simple as:
dviFile <- tinytex::latexmk(proteinTexFile, clean = T, engine = "latex", engine_args = "-shell-escape")
In rare cases (i.e. large proteins) the engine runs out of memory. As I need it to be DVI file I understand I need to use latex engine. I've been trying to increase memory by changing the engine_args value to
dviFile <- tinytex::latexmk(proteinTexFile, clean = T, engine = "latex", engine_args = "-shell-escape -extra_mem_top=10000000 -extra_mem_bot=10000000")
Running the help command on latexmk in linux environment also did not make it any clearer to me.
Any chance I can increase this memory settings within the command itself? As I do not (always) have access as sudo/root.
Kind regards,
Patrick
By filing an issue to this repo, I promise that
xfun::session_info('tinytex')
. I have upgraded all my packages to their latest versions (e.g., R, RStudio, and R packages), and also tried the development version:remotes::install_github('rstudio/tinytex')
.I understand that my issue may be closed if I don't fulfill my promises.
The text was updated successfully, but these errors were encountered: