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optPBN

A mirror site of optPBN from SourceForge

Publications for further information:

Lommel, M.J., Trairatphisan, P., Gäbler, K., Laurini, C., Muller, A., Kaoma, T., Vallar, L., Sauter, T., and Schaffner-Reckinger, E. (2016). L-plastin Ser5 phosphorylation in breast cancer cells and in vitro is mediated by RSK downstream of the ERK/MAPK pathway. FASEB J. http://www.fasebj.org/content/30/3/1218.long

Trairatphisan, P., Wiesinger, M., Bahlawane, C., Haan, S., and Sauter, T. (2016). A Probabilistic Boolean Network Approach for the Analysis of Cancer-Specific Signalling: A Case Study of Deregulated PDGF Signalling in GIST. PLoS One http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0156223

Trairatphisan, P., Mizera, A., Pang, J., Tantar, A.A., and Sauter, T. (2014). optPBN: an optimisation toolbox for probabilistic Boolean networks. PLoS One http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0098001

Trairatphisan, P., Mizera, A., Pang, J., Tantar, A.A., Schneider, J., and Sauter, T. (2013). Recent development and biomedical applications of probabilistic Boolean networks. Cell Commun. Signal http://biosignaling.biomedcentral.com/articles/10.1186/1478-811X-11-46