NAMESPACE

# Generated by roxygen2: do not edit by hand

export(AdjacencyMatrix)
export(addSpectralSimilarity)
export(aracne)
export(bayes)
export(clr)
export(combine)
export(correlation)
export(getLinks)
export(lasso)
export(mz_summary)
export(mz_vis)
export(partialCorrelation)
export(randomForest)
export(rtCorrection)
export(statistical)
export(structural)
export(threshold)
exportMethods(as.data.frame)
exportMethods(dim)
exportMethods(directed)
exportMethods(length)
exportMethods(show)
exportMethods(thresholded)
exportMethods(type)
importClassesFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(BiocParallel,bplapply)
importFrom(GENIE3,GENIE3)
importFrom(GeneNet,cor0.test)
importFrom(GeneNet,ggm.estimate.pcor)
importFrom(GeneNet,n2kappa)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,coolcat)
importFrom(S4Vectors,getListElement)
importFrom(S4Vectors,setValidity2)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,`assay<-`)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,assays)
importFrom(SummarizedExperiment,rowData)
importFrom(bnlearn,boot.strength)
importFrom(corpcor,cor.shrink)
importFrom(corpcor,cor2pcor)
importFrom(dplyr,`%>%`)
importFrom(dplyr,select)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,coord_flip)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,sym)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_minimal)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,show)
importFrom(methods,validObject)
importFrom(parmigene,aracne.a)
importFrom(parmigene,clr)
importFrom(parmigene,knnmi.all)
importFrom(psych,corr.test)
importFrom(rlang,.data)
importFrom(rlang,parse_expr)
importFrom(stabs,glmnet.lasso)
importFrom(stabs,stabsel.matrix)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,pt)
importFrom(stats,sd)
importFrom(tibble,is_tibble)
importFrom(tibble,rownames_to_column)
importFrom(tidyr,pivot_longer)