You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Recently on a discussion on the Tripal git issue queue, @spficklin recommended that we try to parse the values out of this string into its constituent parts, particularly the ID field, which was the crux of that issue. As seen in the example above, the ID and name fields in the generated OBO are largely repetitive.
Things to consider
ID should be a relatively short value
What terms the Tripal OBO importer supports
What term can be assigned to each portion of the long 'name' string
The text was updated successfully, but these errors were encountered:
Discussion:
Currently, the json file pulled down from KEGG has long strings of information in the 'name' key. For example:
When converted with the script, this becomes
Recently on a discussion on the Tripal git issue queue, @spficklin recommended that we try to parse the values out of this string into its constituent parts, particularly the ID field, which was the crux of that issue. As seen in the example above, the ID and name fields in the generated OBO are largely repetitive.
Things to consider
ID should be a relatively short value
What terms the Tripal OBO importer supports
What term can be assigned to each portion of the long 'name' string
The text was updated successfully, but these errors were encountered: