From 791d4421c5dbd4c1eb6c517f470d8f0be11f5ffd Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= <bjoern@gruenings.eu>
Date: Mon, 6 Jan 2025 22:17:02 +0100
Subject: [PATCH] use container /tmp dir

---
 files/galaxy/tpv/tools.yml | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/files/galaxy/tpv/tools.yml b/files/galaxy/tpv/tools.yml
index dd41586ea..7a2702483 100644
--- a/files/galaxy/tpv/tools.yml
+++ b/files/galaxy/tpv/tools.yml
@@ -324,6 +324,8 @@ tools:
     inherits: basic_docker_tool
   toolshed.g2.bx.psu.edu/repos/ecology/harmonize_insitu_to_netcdf/harmonize_insitu_to_netcdf/.*:
     inherits: basic_docker_tool
+    env:
+      _GALAXY_JOB_TMP_DIR: '/tmp'
   # conda env not working, trying the container
   toolshed.g2.bx.psu.edu/repos/imgteam/color_deconvolution/ip_color_deconvolution/.*:
     inherits: basic_docker_tool