MetClassNet · LiesaSalzer · Sep 11, 2020 · Sep 11, 2020 · Sep 11, 2020 · Sep 11, 2020
diff --git a/.Rbuildignore b/.Rbuildignore
@@ -2,4 +2,6 @@
 ^\.git$
 ^\.gitignore$
 ^\.lintr$
-^\.travis.yml$
+^\.travis.yml$
+^.*\.Rproj$
+^\.Rproj\.user$
diff --git a/.gitignore b/.gitignore
@@ -2,4 +2,5 @@
 *.swp
 *.so
 *.o
-*.rds
+*.rds
+.Rproj.user
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -39,4 +39,4 @@ Description: MetNet contains functionality to infer metabolic network topologies
   the two matrices are combined to form a adjacency matrix inferred from both quantitative 
   and structure information. 
 License: GPL (>= 3)
-RoxygenNote: 6.1.1
+RoxygenNote: 7.1.1
diff --git a/MetNet.Rproj b/MetNet.Rproj
@@ -0,0 +1,17 @@
+Version: 1.0
+
+RestoreWorkspace: Default
+SaveWorkspace: Default
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: Sweave
+LaTeX: pdfLaTeX
+
+BuildType: Package
+PackageUseDevtools: Yes
+PackageInstallArgs: --no-multiarch --with-keep.source
diff --git a/NAMESPACE b/NAMESPACE
@@ -1,5 +1,7 @@
 # Generated by roxygen2: do not edit by hand
 
+export(adjacency_list)
+export(annotaionNames)
 export(aracne)
 export(bayes)
 export(clr)
@@ -11,7 +13,9 @@ export(randomForest)
 export(rtCorrection)
 export(statistical)
 export(structural)
+export(summary_mz)
 export(threshold)
+export(threshold_p)
 importFrom(BiocParallel,bplapply)
 importFrom(GENIE3,GENIE3)
 importFrom(bnlearn,arcs)
-Original file line number
+Diff line change
@@ Expand Up / @@ -2,4 +2,5 @@ @@
     *.swp
     *.so
     *.o
-    *.rds
+    *.rds
+    .Rproj.user