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Generally more informative validator output for some messages (plus some)

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@RichardBruskiewich RichardBruskiewich released this 12 Aug 02:37
· 217 commits to master since this release
  • Generally repaired validation 'sources' ('source_trail') context recording to cover all applicable validation message cases (especially, edge 'qualifier' validation); tested with unit tests
  • TRAPIGraphType class moved up the class/module hierarchy, alongside ValidatorReporter; strict_validation as Optional[bool] wrapped in the is_strict_validation() method which uses graph_type to decide on None default strictness (based on graph type)
  • TRAPI and Biolink Model versions resolved now only reported in logger.info, not stderr
  • only preset target_provenance in validator reporter constructors, not the various method signatures
  • add 'categories' into edge context labels for reports (long lists of categories may be challenging here but ...)