NNS 10.9.1 Beta #4
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# This workflow uses actions that are not certified by GitHub. | |
# They are provided by a third-party and are governed by | |
# separate terms of service, privacy policy, and support | |
# documentation. | |
# | |
# See https://github.com/r-lib/actions/tree/master/examples#readme for | |
# additional example workflows available for the R community. | |
on: | |
push: | |
branches: [ "NNS-Beta-Version" ] | |
pull_request: | |
branches: [ "NNS-Beta-Version" ] | |
workflow_dispatch: | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: windows-latest, r: 'release'} | |
- {os: windows-latest, r: 'devel'} | |
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
# - {os: macos-latest, r: 'devel'} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
_R_CHECK_FORCE_SUGGESTS_: false | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
RGL_USE_NULL: true | |
R_KEEP_PKG_SOURCE: yes | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install dependencies on MacOS | |
if: runner.os == 'macOS' | |
run: | | |
brew install xquartz | |
brew install fribidi | |
brew install gsl # Install GSL library on macOS | |
- name: Set up GSL environment variables on MacOS | |
if: runner.os == 'macOS' | |
run: | | |
export PKG_CPPFLAGS="-I$(brew --prefix gsl)/include" | |
export PKG_LIBS="-L$(brew --prefix gsl)/lib -lgsl -lgslcblas -lm" | |
shell: bash | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- name: Install CRAN libjpeg on MacOS | |
if: runner.os == 'macOS' | |
run: | | |
ARCH=`uname -m` | |
if [ ! -e /opt/R/$ARCH ]; then sudo mkdir -p /opt/R/$ARCH; sudo chown -R $USER /opt/R; fi | |
sudo Rscript -e 'dep="jpeg"; source("https://mac.R-project.org/bin/install.R"); install.libs(dep)' | |
if ! echo $PATH | grep /opt/R/$ARCH/bin >/dev/null; then echo /opt/R/$ARCH/bin > newPATH; cat $GITHUB_PATH >> newPATH; cat newPATH > $GITHUB_PATH; fi | |
shell: bash | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
extra-packages: any::rcmdcheck | |
needs: check | |
- name: Install R packages | |
run: | | |
install.packages(c("remotes", "rcmdcheck", "Rfast", "recipes")) | |
remotes::install_cran("rgl") | |
remotes::install_deps(dependencies = TRUE) | |
shell: Rscript {0} | |
- name: Check | |
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--ignore-vignettes", "--no-build-vignettes"), build_args = c("--no-manual", "--ignore-vignettes", "--no-build-vignettes"), error_on = "error") | |
shell: Rscript {0} |