Skip to content

Releases: ShawHahnLab/vquest

Version 0.0.10

11 Oct 19:35
bd2affe
Compare
Choose a tag to compare

Added

  • FASTQ support (#37)

Changed

Fixed

  • Usage example now matches packaged structure (#36)
  • Requests to the IMGT server now use HTTPS (#34)

Version 0.0.9

20 Jul 14:48
9fab52a
Compare
Choose a tag to compare

Added

  • --outdir argument to set output directory other than current working
    directory (#24)
  • --no-collapse argument (and updates to request function) to disable
    automatic combining of results across batched submissions (#25)

Fixed

  • Empty config files now result in the usual error message about required
    options (#30)
  • All command-line options now match V-QUEST option names (#28)

Version 0.0.8

13 Jul 19:12
df7ca99
Compare
Choose a tag to compare

Fixed

  • Don't include a trailing empty submission when submitting perfect multiples
    of 50 sequences (#19)

Version 0.0.7

18 Mar 16:28
956f7d3
Compare
Choose a tag to compare

Fixed

  • Removed a duplicate data directory from build/install process (#16)

Version 0.0.6

15 Mar 18:14
a15f1b5
Compare
Choose a tag to compare

Changed

  • Refactored top-level code into separate modules (#13)

Fixed

  • Avoid trying to import dependencies at install time (#13)

Version 0.0.5

10 Mar 18:32
d940e15
Compare
Choose a tag to compare

Added

  • --align argument (via airr_to_fasta function) for exraction of sequence
    alignment FASTA from AIRR results (#1)
  • Error messages sent by the server are now raised as an exception containing
    the server-provided message(s) (#7)

Changed

  • Reorganized and expanded test code as its own package (#6)
  • Added basic test of command-line usage (#10)
  • Clarified wording on required options (#8)

Fixed

  • Parse command-line options that should be integers from a finite list of
    options as integers instead of strings (#5)

Version 0.0.4

02 Dec 20:40
Compare
Choose a tag to compare
v0.0.4

fix reqs and store version num in package