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proali Error “line 22: 54565 Killed "${EXE}_avx512" "$@"” #71

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mushroomOK opened this issue Apr 6, 2024 · 1 comment
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@mushroomOK
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Hi, Dr Song,
Thanks for your great software, firstly.

Command“anchorwave proali -i xx.gff -as xx.cds.fa -r xx.fa -a xx.cds.sam -ar xx.ref.sam -s yy.fasta -n anchors -R 1 -Q 2 -o alignment-2.maf -f alignment.f-2.maf -t 50”

Error log: “AVX512 is enabled
setupAnchorsWithSpliceAlignmentResultQuota begin!
using parameters detected from the input SAM file for novel anchors identification
totalAnchors:24
anchors generate done!
/home/wangxf/miniconda3/envs/anchorwave/bin/anchorwave: line 22: 54565 Killed "${EXE}_avx512" "$@"”

Do you have any idea about this error? Thanks!

Xiangfeng

@baoxingsong
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image

please pay attention to the memory cost.

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