Merge pull request #30 from broadinstitute/update-dependency-versions

Update numpy/scipy requirements
broadinstitute · Jul 31, 2019 · b0cb3e8 · b0cb3e8
2 parents af84d31 + 6b9cf10
commit b0cb3e8
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Showing 4 changed files with 6 additions and 4 deletions.
diff --git a/.coveragerc b/.coveragerc
@@ -1,4 +1,6 @@
 [run]
+# Measure branch coverage in addition to
+# statement coverage
 branch = True
 
 [report]

diff --git a/README.md b/README.md
@@ -38,8 +38,8 @@ It allows blacklisting sequence from the design (e.g., background in microbial e
 
 CATCH requires:
 * [Python](https://www.python.org) &gt;= 3.5
-* [NumPy](http://www.numpy.org) &gt;= 1.9.0
-* [SciPy](https://www.scipy.org) &gt;= 1.0.0
+* [NumPy](http://www.numpy.org) &gt;= 1.15.2
+* [SciPy](https://www.scipy.org) &gt;= 1.2.0
 
 Installing CATCH with `pip` (or conda), as described below, will install NumPy and SciPy if they are not already installed.
 

diff --git a/requirements.txt b/requirements.txt
@@ -1,2 +1,2 @@
 numpy==1.15.2
-scipy==1.1.0
+scipy==1.2.0
diff --git a/setup.py b/setup.py
@@ -14,7 +14,7 @@
       author='Hayden Metsky',
       author_email='hayden@mit.edu',
       packages=find_packages(),
-      install_requires=['numpy>=1.9.0', 'scipy>=1.0.0'],
+      install_requires=['numpy>=1.15.2', 'scipy>=1.2.0'],
       scripts=[
           'bin/analyze_probe_coverage.py',
           'bin/design.py',