Build and Test GATK 4

Fixing LoadData error discovered in delcho run #3273

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Triggered via pull request October 18, 2023 20:40

synchronize #8556

delcho_write_missing_intervals_error

Status Success

Total duration 1h 28m 0s

Artifacts 8

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gatk-tests.yml

on: pull_request

check if the environment has privileges

build and push gatk docker to artifacts

Validate script WDLs using womtools

Validate generated WDLs using womtools

Matrix: wdlTests

Matrix: test

Matrix: testOnDocker

Annotations

1 error

WDL test RUN_CNV_SOMATIC_WDL on cromwell

Process completed with exit code 128.

Artifacts

Produced during runtime

Name	Size
gatkDockerImage Expired	2.11 GB
test-results-17.0.6+10-cloud Expired	322 KB
test-results-17.0.6+10-integration Expired	3.46 MB
test-results-17.0.6+10-unit Expired	155 MB
test-results-docker-17.0.6+10-conda Expired	282 KB
test-results-docker-17.0.6+10-integration Expired	3.38 MB
test-results-docker-17.0.6+10-unit Expired	153 MB
test-results-docker-17.0.6+10-variantcalling Expired	234 KB