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feat: update EFO to 3.71.0 (#242)
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## Reason for Change


https://app.zenhub.com/workspaces/single-cell-5e2a191dad828d52cc78b028/issues/gh/chanzuckerberg/cellxgene-ontology-guide/241

## Changes

updates to use EFO v3.71.0

## Testing steps

existing unit tests?

## Notes for Reviewer

---------

Co-authored-by: github-actions <github-actions@github.com>
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joyceyan and github-actions authored Nov 14, 2024
1 parent 56051f9 commit 7a92c0f
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2 changes: 1 addition & 1 deletion api/python/ontology-assets-version.txt
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7a9e06aa9e78ccef396c93e84362ff071b5bc085
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38 changes: 19 additions & 19 deletions ontology-assets/ontology_info.json
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{
"5.2.0": {
"5.3.0": {
"ontologies": {
"CL": {
"version": "v2024-08-16",
"source": "https://github.com/obophenotype/cell-ontology/releases/download",
"filename": "cl.owl"
},
"EFO": {
"version": "v3.69.0",
"version": "v3.71.0",
"source": "https://github.com/EBISPOT/efo/releases/download",
"filename": "efo.owl"
},
Expand Down Expand Up @@ -48,15 +48,15 @@
}
}
},
"5.1.0": {
"5.2.0": {
"ontologies": {
"CL": {
"version": "v2024-04-05",
"version": "v2024-08-16",
"source": "https://github.com/obophenotype/cell-ontology/releases/download",
"filename": "cl.owl"
},
"EFO": {
"version": "v3.65.0",
"version": "v3.69.0",
"source": "https://github.com/EBISPOT/efo/releases/download",
"filename": "efo.owl"
},
Expand All @@ -66,18 +66,18 @@
"filename": "hancestro.owl"
},
"HsapDv": {
"version": "11",
"source": "http://aber-owl.net/media/ontologies/HSAPDV",
"version": "v2024-05-28",
"source": "https://github.com/obophenotype/developmental-stage-ontologies/releases/download",
"filename": "hsapdv.owl"
},
"MONDO": {
"version": "v2024-05-08",
"version": "v2024-08-06",
"source": "https://github.com/monarch-initiative/mondo/releases/download",
"filename": "mondo.owl"
},
"MmusDv": {
"version": "9",
"source": "http://aber-owl.net/media/ontologies/MMUSDV",
"version": "v2024-05-28",
"source": "https://github.com/obophenotype/developmental-stage-ontologies/releases/download",
"filename": "mmusdv.owl"
},
"NCBITaxon": {
Expand All @@ -86,7 +86,7 @@
"filename": "ncbitaxon.owl.gz"
},
"UBERON": {
"version": "v2024-03-22",
"version": "v2024-08-07",
"source": "https://github.com/obophenotype/uberon/releases/download",
"filename": "uberon.owl"
},
Expand All @@ -96,17 +96,17 @@
"filename": "pato.owl"
}
},
"deprecated_on": "2024-08-19"
"deprecated_on": "2024-11-13"
},
"5.0.0": {
"5.1.0": {
"ontologies": {
"CL": {
"version": "v2024-01-04",
"version": "v2024-04-05",
"source": "https://github.com/obophenotype/cell-ontology/releases/download",
"filename": "cl.owl"
},
"EFO": {
"version": "v3.62.0",
"version": "v3.65.0",
"source": "https://github.com/EBISPOT/efo/releases/download",
"filename": "efo.owl"
},
Expand All @@ -121,7 +121,7 @@
"filename": "hsapdv.owl"
},
"MONDO": {
"version": "v2024-01-03",
"version": "v2024-05-08",
"source": "https://github.com/monarch-initiative/mondo/releases/download",
"filename": "mondo.owl"
},
Expand All @@ -136,7 +136,7 @@
"filename": "ncbitaxon.owl.gz"
},
"UBERON": {
"version": "v2024-01-18",
"version": "v2024-03-22",
"source": "https://github.com/obophenotype/uberon/releases/download",
"filename": "uberon.owl"
},
Expand All @@ -146,6 +146,6 @@
"filename": "pato.owl"
}
},
"deprecated_on": "2024-05-10"
"deprecated_on": "2024-08-19"
}
}
}

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