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chore: badges in README
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clintval committed Dec 16, 2024
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[![Java Version](https://img.shields.io/badge/java-11,17,21-c22d40.svg)](https://github.com/AdoptOpenJDK/homebrew-openjdk)
[![Python Versions](https://img.shields.io/badge/python-3.11_|_3.12_|_3.13-blue)](https://github.com/clintval/typeline)

Tools for programmatically annotating VCFs with the Seshat TP53 database.
Tools for programmatically annotating VCFs with the [Seshat TP53 database](http://vps338341.ovh.net/).

![Mount Shuksan](.github/img/cover.jpg)

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## Quick Usage Example

For a round-trip annotation of a VCF file, execute a command like:
For round-trip Seshat annotation of a VCF file, execute a command like:

```bash
❯ seshat round-trip \
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## Upload a VCF to Seshat

Upload a VCF to the [Seshat TP53 annotation server](http://vps338341.ovh.net/) using a headless browser.
Upload a VCF to the Seshat annotation webserver using a headless browser.

```bash
❯ seshat upload-vcf \
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## Download a Seshat Annotation from Gmail

Download [Seshat](http://vps338341.ovh.net/) VCF annotations by awaiting a server-generated email.
Download Seshat VCF annotations by awaiting a server-generated email.

```bash
❯ seshat find-in-gmail \
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## Merge Annotations into a VCF

Merge annotations into the `INFO` fields of the VCF.
Merge Seshat annotations into the `INFO` fields of the VCF.

```bash
❯ seshat merge \
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