Lower res figures

DataAnalysis/Vignette1.md

@@ -103,6 +103,6 @@ Vignette 1 Table S1. JAGS output for the above model.
 | tau.t      |    1.39|    0.02|   11.30|  1.00|
 | deviance   |  415.77|  407.17|  426.68|  1.00|
 
-![](../Figures/Figure3.tiff)
+![](../Figures/Figure3.png)
 
 Figure 3. Annual mean estimates of the total size of each of the four hyena clans monitored. One year lag effect of mean hyena subgroup size found at kills on clan size for each of the four clans. We estimated a 99.8% probability that subgroup size had a positive lag effect on clan size in Talek, but no effect was estimated on the other clans.

DataAnalysis/Vignette4.md

@@ -132,6 +132,6 @@ gs[i] ~ dpois(gs.lam.star[rep[i], site[i]]) T(1,)
 }
 ```
 
-![](../Figures/Figure6.tiff)
+![](../Figures/Figure6.png)
 
 Figure 6. Parameter estimates from a community model (a,b) and a single-species model for black-backed jackal and spotted hyena (c,d) showing the effects of disturbance (log scale) on the number of groups and subgroup sizes. Note that a positive effect of disturbance is interpreted as a higher value in the Talek region than in the Mara Triangle. Mean values are indicated with small horizontal bars; 50% and 95% credible intervals are shown with thick and thin vertical bars, respectively. (a) Effect of disturbance on the expected number of individuals or subgroups for all species as estimated using a community model. (b) Effect of disturbance on the expected subgroup size for each species estimated with a community model. (c) Estimates of the effects of disturbance, African lion, cattle and sheep/goats on the expected number of black-backed jackal (BBJ) and spotted hyena (SH) subgroups estimated in single-species models. (d) Estimates of the effects of disturbance, African lion, cattle and sheep/goats on the expected subgroup size of black-backed jackal and spotted hyena estimated with singlespecies models.