[#4] Added URI mapping & extended example file

gfbio · Jul 10, 2024 · a85c38b · a85c38b
1 parent c3cb8ed
commit a85c38b
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Showing 2 changed files with 20 additions and 0 deletions.
diff --git a/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt b/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
@@ -12,6 +12,8 @@ exclude-result-prefixes="xsl md panxslt set">
 
   <xsl:output method="xml" version="1.0" encoding="UTF-8" indent="yes"/>
   <xsl:variable name="dataset_id" select="/abcd:DataSets/abcd:DataSet/abcd:DatasetGUID"></xsl:variable>
+  <xsl:variable name="dataset_icon" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:IconURI"></xsl:variable>
+  <xsl:variable name="dataset_access" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:DirectAccessURI"></xsl:variable>
   <xsl:variable name="dataset_title" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:Description/abcd:Representation/abcd:Title"></xsl:variable>
   <xsl:variable name="dataset_details" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:Description/abcd:Representation/abcd:Details"></xsl:variable>
   <xsl:variable name="dataset_url" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:Description/abcd:Representation/abcd:URI"></xsl:variable>
@@ -63,6 +65,22 @@ exclude-result-prefixes="xsl md panxslt set">
           </xsl:choose>
        <!-- </xsl:variable>-->
       </description>
+      <xsl:if test="$dataset_icon">
+        <image><xsl:value-of select="$dataset_icon" /></image>
+      </xsl:if>
+      <xsl:if test="$dataset_access">
+        <distribution type="DataDownload">
+          <xsl:choose>
+            <xsl:when test="contains($dataset_access,'.zip')">
+              <contentUrl><xsl:value-of select="$dataset_access" /></contentUrl>
+              <encodingFormat>application/zip</encodingFormat>
+            </xsl:when>
+            <xsl:otherwise>
+              <url><xsl:value-of select="$dataset_access" /></url>
+            </xsl:otherwise>
+          </xsl:choose>
+        </distribution>
+      </xsl:if>
       <inLanguage>en</inLanguage>
       <xsl:for-each select="$recordbasis[not(.=preceding::*)]">  
         <additionalType><xsl:value-of select="."/></additionalType>

diff --git a/transformations/abcd2bioschemas/example_files/HoffmannPlantsV3.xml b/transformations/abcd2bioschemas/example_files/HoffmannPlantsV3.xml
@@ -24,6 +24,8 @@
                     <URI>https://data.bgbm.org/dataset/gfbio/0004/</URI>
                 </Representation>
             </Description>
+            <IconURI>http://ww3.bgbm.org/providerResources/BGBM.jpg</IconURI>
+            <DirectAccessURI>https://data-rebind.bgbm.org/rest//db/gfbio/public/GFBioHoffmannPlants/archive/HoffmannPlantsV2.xml.zip</DirectAccessURI>
             <RevisionData>
                 <Creators>Dr. Anke Hoffmann</Creators>
                 <Contributors>Tom Friday Baluku, Maren Gleisberg</Contributors>