Use annotation file object as input for tasks - fix #84 #73
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| name: Pipeline CI | |
| on: | |
| push: | |
| branches: | |
| - master | |
| - dev | |
| pull_request: | |
| branches: | |
| - master | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| profile: | |
| - gemflux | |
| - starrsem | |
| - starflux | |
| - markdup | |
| - rmdup | |
| - ihec | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Java | |
| uses: actions/setup-java@v3 | |
| with: | |
| distribution: zulu | |
| java-version: 16 | |
| java-package: jre | |
| - name: Run pipeline | |
| run: . .circ && ci test | |
| env: | |
| CI_PROFILE: ${{ matrix.profile }} |