Skip to content

Commit

Permalink
Update dev docs
Browse files Browse the repository at this point in the history
  • Loading branch information
shyuep committed Aug 18, 2019
1 parent 0b66ee2 commit 51d84ea
Show file tree
Hide file tree
Showing 36 changed files with 1,525 additions and 871 deletions.
17 changes: 7 additions & 10 deletions docs/_modules/index.html
Original file line number Diff line number Diff line change
@@ -1,12 +1,10 @@

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html>

<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>Overview: module code &#8212; pymatgen-diffusion 2019.2.28 documentation</title>
<meta charset="utf-8" />
<title>Overview: module code &#8212; pymatgen-diffusion 2019.8.18 documentation</title>
<link rel="stylesheet" href="../_static/flasky.css" type="text/css" />
<link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
Expand Down Expand Up @@ -39,7 +37,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../index.html">pymatgen-diffusion 2019.2.28 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../index.html">pymatgen-diffusion 2019.8.18 documentation</a> &#187;</li>
</ul>
</div>

Expand All @@ -52,6 +50,7 @@ <h1>All modules for which code is available</h1>
<ul><li><a href="pymatgen_diffusion/aimd/clustering.html">pymatgen_diffusion.aimd.clustering</a></li>
<li><a href="pymatgen_diffusion/aimd/pathway.html">pymatgen_diffusion.aimd.pathway</a></li>
<li><a href="pymatgen_diffusion/aimd/van_hove.html">pymatgen_diffusion.aimd.van_hove</a></li>
<li><a href="pymatgen_diffusion/neb/full_path_mapper.html">pymatgen_diffusion.neb.full_path_mapper</a></li>
<li><a href="pymatgen_diffusion/neb/io.html">pymatgen_diffusion.neb.io</a></li>
<li><a href="pymatgen_diffusion/neb/pathfinder.html">pymatgen_diffusion.neb.pathfinder</a></li>
</ul>
Expand All @@ -66,13 +65,11 @@ <h1>All modules for which code is available</h1>
</ul></li>
</ul>
<div id="searchbox" style="display: none" role="search">
<h3>Quick search</h3>
<h3 id="searchlabel">Quick search</h3>
<div class="searchformwrapper">
<form class="search" action="../search.html" method="get">
<input type="text" name="q" />
<input type="text" name="q" aria-labelledby="searchlabel" />
<input type="submit" value="Go" />
<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
</form>
</div>
</div>
Expand Down
16 changes: 6 additions & 10 deletions docs/_modules/pymatgen_diffusion/aimd/clustering.html
Original file line number Diff line number Diff line change
@@ -1,12 +1,10 @@

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html>

<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>pymatgen_diffusion.aimd.clustering &#8212; pymatgen-diffusion 2019.2.28 documentation</title>
<meta charset="utf-8" />
<title>pymatgen_diffusion.aimd.clustering &#8212; pymatgen-diffusion 2019.8.18 documentation</title>
<link rel="stylesheet" href="../../../_static/flasky.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
Expand Down Expand Up @@ -39,7 +37,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">pymatgen-diffusion 2019.2.28 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">pymatgen-diffusion 2019.8.18 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
Expand Down Expand Up @@ -223,13 +221,11 @@ <h1>Source code for pymatgen_diffusion.aimd.clustering</h1><div class="highlight
</ul></li>
</ul>
<div id="searchbox" style="display: none" role="search">
<h3>Quick search</h3>
<h3 id="searchlabel">Quick search</h3>
<div class="searchformwrapper">
<form class="search" action="../../../search.html" method="get">
<input type="text" name="q" />
<input type="text" name="q" aria-labelledby="searchlabel" />
<input type="submit" value="Go" />
<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
</form>
</div>
</div>
Expand Down
16 changes: 6 additions & 10 deletions docs/_modules/pymatgen_diffusion/aimd/pathway.html
Original file line number Diff line number Diff line change
@@ -1,12 +1,10 @@

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html>

<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>pymatgen_diffusion.aimd.pathway &#8212; pymatgen-diffusion 2019.2.28 documentation</title>
<meta charset="utf-8" />
<title>pymatgen_diffusion.aimd.pathway &#8212; pymatgen-diffusion 2019.8.18 documentation</title>
<link rel="stylesheet" href="../../../_static/flasky.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
Expand Down Expand Up @@ -39,7 +37,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">pymatgen-diffusion 2019.2.28 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">pymatgen-diffusion 2019.8.18 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
Expand Down Expand Up @@ -436,13 +434,11 @@ <h1>Source code for pymatgen_diffusion.aimd.pathway</h1><div class="highlight"><
</ul></li>
</ul>
<div id="searchbox" style="display: none" role="search">
<h3>Quick search</h3>
<h3 id="searchlabel">Quick search</h3>
<div class="searchformwrapper">
<form class="search" action="../../../search.html" method="get">
<input type="text" name="q" />
<input type="text" name="q" aria-labelledby="searchlabel" />
<input type="submit" value="Go" />
<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
</form>
</div>
</div>
Expand Down
16 changes: 6 additions & 10 deletions docs/_modules/pymatgen_diffusion/aimd/van_hove.html
Original file line number Diff line number Diff line change
@@ -1,12 +1,10 @@

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<!DOCTYPE html>

<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>pymatgen_diffusion.aimd.van_hove &#8212; pymatgen-diffusion 2019.2.28 documentation</title>
<meta charset="utf-8" />
<title>pymatgen_diffusion.aimd.van_hove &#8212; pymatgen-diffusion 2019.8.18 documentation</title>
<link rel="stylesheet" href="../../../_static/flasky.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../../" src="../../../_static/documentation_options.js"></script>
Expand Down Expand Up @@ -39,7 +37,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">pymatgen-diffusion 2019.2.28 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../../index.html">pymatgen-diffusion 2019.8.18 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
Expand Down Expand Up @@ -835,13 +833,11 @@ <h1>Source code for pymatgen_diffusion.aimd.van_hove</h1><div class="highlight">
</ul></li>
</ul>
<div id="searchbox" style="display: none" role="search">
<h3>Quick search</h3>
<h3 id="searchlabel">Quick search</h3>
<div class="searchformwrapper">
<form class="search" action="../../../search.html" method="get">
<input type="text" name="q" />
<input type="text" name="q" aria-labelledby="searchlabel" />
<input type="submit" value="Go" />
<input type="hidden" name="check_keywords" value="yes" />
<input type="hidden" name="area" value="default" />
</form>
</div>
</div>
Expand Down
Loading

0 comments on commit 51d84ea

Please sign in to comment.