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[FEAT] 518 extraction phase can we make the list of studies more spreadsheet like #820

Merged
merged 7 commits into from
Sep 19, 2024
Merged

[FEAT] 518 extraction phase can we make the list of studies more spreadsheet like #820

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a2cbc04
feat: added wireframes for extraction
nicoalee Sep 7, 2024
c5ccc42
Merge branch 'master' into 518-extraction-phase-can-we-make-the-list-…
nicoalee Sep 10, 2024
2e5aac8
feat: added table
nicoalee Sep 10, 2024
574bdbe
feat: implemented table and table ordering during study edit
nicoalee Sep 17, 2024
0d73686
feat: preserve table state in session storage and fix unit tests
nicoalee Sep 18, 2024
7e07a12
Merge branch 'master' into 518-extraction-phase-can-we-make-the-list-…
nicoalee Sep 18, 2024
a4b693f
feat: finished integration tests
nicoalee Sep 18, 2024
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2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/BaseStudyPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ const PAGE_NAME = 'BaseStudyPage';

describe(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', `https://api.semanticscholar.org/**`, {
fixture: 'semanticScholar',
}).as('semanticScholarFixture');
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2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/EditStudyPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ const PAGE_NAME = 'EditStudyPage';

describe(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
cy.intercept('GET', `https://api.semanticscholar.org/**`, {
fixture: 'semanticScholar',
Expand Down
2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/LandingPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ const PAGE_NAME = 'LandingPage';

describe(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
cy.intercept('GET', `**/api/base-studies/**`, {
fixture: 'baseStudies/baseStudiesNoResults',
Expand Down
2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/MetaAnalysisPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ const PAGE_NAME = 'MetaAnalysisPage';

describe(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
cy.intercept('GET', `**/api/specifications/**`, { fixture: 'specification' }).as(
'specificationFixture'
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2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/ProjectMetaAnalysesPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ const PAGE_NAME = 'ProjectMetaAnalysesPage';

describe(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
cy.intercept('GET', `**/api/specifications/**`, { fixture: 'specification' }).as(
'specificationFixture'
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2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/ProjectPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ const PAGE_NAME = 'ProjectPage';

describe(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
cy.intercept('POST', `https://www.google-analytics.com/*/**`, {}).as(
'googleAnalyticsFixture'
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2 changes: 1 addition & 1 deletion compose/neurosynth-frontend/cypress/e2e/pages/PublicStudiesPage.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ const PAGE_NAME = 'StudiesPage';

describe.skip(PAGE_NAME, () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
});

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12 changes: 6 additions & 6 deletions compose/neurosynth-frontend/cypress/e2e/workflows/Curation/ImportStudiesDialog.cy.tsx
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

describe('ImportStudiesDialog', () => {
beforeEach(() => {
cy.clearLocalStorage().clearSessionStorage();
cy.clearLocalStorage();
cy.intercept('GET', 'https://api.appzi.io/**', { fixture: 'appzi' }).as('appziFixture');
cy.intercept('GET', `**/api/projects/*`, {
fixture: 'projects/projectExtractionStep',
Expand Down Expand Up @@ -198,14 +198,14 @@ describe('ImportStudiesDialog', () => {
});

it('should set the source and show the input', () => {
cy.get('input[role="combobox"').click();
cy.get('input[role="combobox"]').click();
cy.contains('li', 'Scopus').click();
cy.get('textarea').should('be.visible');
cy.contains(/Input is empty/).should('be.visible');
});

it('should set the sources and enable the next button', () => {
cy.get('input[role="combobox"').click();
cy.get('input[role="combobox"]').click();
cy.contains('li', 'Scopus').click();
cy.get('textarea[placeholder="paste in valid endnote, bibtex, or RIS syntax"]')
.click()
Expand All @@ -220,7 +220,7 @@ describe('ImportStudiesDialog', () => {
});

it('should show an error message', () => {
cy.get('input[role="combobox"').click();
cy.get('input[role="combobox"]').click();
cy.contains('li', 'Scopus').click();
cy.get('textarea[placeholder="paste in valid endnote, bibtex, or RIS syntax"]').type(
'INVALID FORMAT'
Expand All @@ -229,7 +229,7 @@ describe('ImportStudiesDialog', () => {
});

it('should import studies', () => {
cy.get('input[role="combobox"').click();
cy.get('input[role="combobox"]').click();
cy.contains('li', 'Scopus').click();
cy.get('textarea[placeholder="paste in valid endnote, bibtex, or RIS syntax"]')
.click()
Expand All @@ -249,7 +249,7 @@ describe('ImportStudiesDialog', () => {
});

it('should upload a onenote (ENW) file', () => {
cy.get('input[role="combobox"').click();
cy.get('input[role="combobox"]').click();
cy.contains('li', 'Scopus').click();
cy.get('label[role="button"]').selectFile(
'cypress/fixtures/standardFiles/onenoteStudies.txt'
Expand Down
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