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release: bumps version to 0.2.0
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claymcleod committed Sep 18, 2022
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23 changes: 23 additions & 0 deletions CHANGELOG.md
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# Changelog

## 0.2.0 — 09-18-2022

### Added

* `ngs qc`: adds `ngs qc` command with the initial four modules:
* _General metrics_ reports general statistics about the records contained within the file.
* _GC content_ reports statistics regarding the GC content for records within the file.
* _Genomic features_ reports statistics regarding genomic features contained within a GFF file.
* _Template length_ reports statistics regarding the template lengths contained within the file.
* `ngs generate`: adds support to generate files resulting from one or more reference FASTAs.

### Removed

* `ngs flagstat`: `ngs flagstat` has been removed in favor of the general metrics module in `ngs qc`.

## 0.1.0 — 05-10-2022

### Added

* `ngs derive`: added experimental support for `ngs derive instrument`.
* `ngs flagstat`: added experimental support for `ngs flagstat`.
2 changes: 1 addition & 1 deletion Cargo.lock

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10 changes: 5 additions & 5 deletions Cargo.toml
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Expand Up @@ -4,7 +4,7 @@ license = "MIT"
name = "ngs"
publish = true
description = "Command line tool for processing next-generation sequencing data."
version = "0.1.0"
version = "0.2.0"

# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html

Expand All @@ -15,8 +15,8 @@ flate2 = "1.0.23"
futures = "0.3.21"
git-testament = "0.2.1"
indicatif = "0.16.2"
noodles-bam = {version = "0.21.0", features = ["async"]}
noodles-bgzf = {version = "0.14.0", features = ["libdeflate"]}
noodles-bam = { version = "0.21.0", features = ["async"] }
noodles-bgzf = { version = "0.14.0", features = ["libdeflate"] }
noodles-core = "0.8.0"
noodles-fasta = "0.13.0"
noodles-fastq = "0.5.0"
Expand All @@ -27,9 +27,9 @@ rand = "0.8.5"
rand_distr = "0.4.3"
regex = "1.5.5"
rust-lapper = "1.0.1"
serde = {version = "1.0.137", features = ["derive"]}
serde = { version = "1.0.137", features = ["derive"] }
serde_json = "1.0.81"
tokio = {version = "1.18.0", features = ["fs", "rt-multi-thread"] }
tokio = { version = "1.18.0", features = ["fs", "rt-multi-thread"] }
tracing = "0.1.34"
tracing-subscriber = "0.3.11"

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