convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations
-
Updated
Sep 16, 2019 - Go
#
dbsnp
Here are 11 public repositories matching this topic...
Methods for mapping genomic data onto 3D protein structure.
binder genomics protein-data-bank protein-structure pyspark mutations dbsnp protein-protein-interaction protein-ligand-interactions cyverse protein-drug-interactions mmtf-pyspark
-
Updated
May 17, 2022 - Jupyter Notebook
An Open Source Web Application for Genetic Data (SNPs) Data Crawling
snps genome genetic-algorithm dbsnp phenotype snpedia clinvar omni 23andme genetic-data ancestrydna data-crawling rsid genetic-tests os-genome
-
Updated
Dec 8, 2022 - JavaScript
Warehousing DbSNP's JSON Data into PostgreSQL
-
Updated
Jun 26, 2018 - Python
Identification of cancer-causing variants
bioinformatics annotations clinical dbsnp variants cancer-genomics clinvar diseases cancer-research grch37 cancer-detection allele-frequencies conservation-scores functional-prediction pathogenic-variants dbnsfp gnomad clinical-significance hereditary-cancer-syndrome acmg-guidelines
-
Updated
Apr 19, 2024 - Python
biopython + VCF support, based on pyVCF
-
Updated
Jul 6, 2017 - Python
ETL scripts to populate caBIO database
python java database perl dbsnp shell-scripts pathways transcriptomics uniprotkb unigene etl-pipeline
-
Updated
Oct 19, 2021
Non-biallelic SNPs for population genetics and forensics.
-
Updated
Mar 18, 2018 - C
This folder contains R scripts for differential expression analysis and analyses of tissue-specific expression, inter-species conservation, and genetic variations of the CAPN10 gene in a bioinformatics project on PCOS and insulin resistance.
dbsnp gtex clinvar differential-expression ncbi-geo limma ucsc-browser expression-atlas dbvar microarray-data-analysis human-protein-atlas pcos-database
-
Updated
Jan 8, 2025 - R
Improve this page
Add a description, image, and links to the dbsnp topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the dbsnp topic, visit your repo's landing page and select "manage topics."