Automated covariate modeling using efficient simulation of pharmacokinetics

This repo contains code to replicate the results and figures in the paper "Automated covariate modeling using efficient simulation of pharmacokinetics".

Get started

Start by cloning the repo

git clone https://github.com/wahlquisty/automated-covariate-modeling-with-fastpksim

Install julia and instantiate the environment by running julia and in the Julia REPL, run:

using Pkg
Pkg.instantiate(".")

Main results - Covariate model from NNs

To get the main results of the paper, run in the Julia REPL:

include("NNFastPKSim.jl")

To plot the results and save them to csv file in folder csv/:

include("plotresults.jl")