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M	.setup/build/betaMC.pdf
M	.setup/build/betaMC_1.3.2.9000.tar.gz
A	.setup/latex/bib/quarto.bib
D	.setup/latex/pdf/.gitignore
D	.setup/latex/pdf/betaMC-001-description.pdf
D	.setup/latex/pdf/betaMC-999-session.pdf
D	.setup/latex/pdf/betaMC-zzz-references.pdf
D	.setup/latex/pdf/betaMC-zzz-tests-benchmark.pdf
D	.setup/latex/pdf/betaMC-zzz-tests-external.pdf
D	.setup/latex/pdf/betaMC-zzz-tests-internal.pdf
D	.setup/latex/pdf/betaMC-zzz-tests-staging.pdf
D	.setup/latex/pdf/bib.bib
M	README.md
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jeksterslab committed Oct 22, 2024
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@Article{Wright-1918,
author = {Sewall Wright},
date = {1918-07},
journaltitle = {Genetics},
title = {On the nature of size factors},
doi = {10.1093/genetics/3.4.367},
number = {4},
pages = {367--374},
volume = {3},
publisher = {Oxford University Press ({OUP})},
}
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50 changes: 25 additions & 25 deletions README.md
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Expand Up @@ -119,9 +119,9 @@ BetaMC(mvn, alpha = 0.05)
#> Standardized regression slopes
#> type = "mvn"
#> est se R 2.5% 97.5%
#> NARTIC 0.4951 0.0760 20000 0.3387 0.6351
#> PCTGRT 0.3915 0.0763 20000 0.2390 0.5362
#> PCTSUPP 0.2632 0.0752 20000 0.1167 0.4111
#> NARTIC 0.4951 0.0758 20000 0.3402 0.6361
#> PCTGRT 0.3915 0.0767 20000 0.2368 0.5383
#> PCTSUPP 0.2632 0.0746 20000 0.1177 0.4094
```

#### Asymptotic distribution-free Approach
Expand All @@ -133,10 +133,10 @@ BetaMC(adf, alpha = 0.05)
#>
#> Standardized regression slopes
#> type = "adf"
#> est se R 2.5% 97.5%
#> NARTIC 0.4951 0.068 20000 0.3511 0.6168
#> PCTGRT 0.3915 0.071 20000 0.2418 0.5197
#> PCTSUPP 0.2632 0.077 20000 0.1054 0.4087
#> est se R 2.5% 97.5%
#> NARTIC 0.4951 0.0679 20000 0.3513 0.6170
#> PCTGRT 0.3915 0.0712 20000 0.2418 0.5228
#> PCTSUPP 0.2632 0.0769 20000 0.1071 0.4090
```

#### Heteroskedasticity Consistent Approach (HC3)
Expand All @@ -149,9 +149,9 @@ BetaMC(hc3, alpha = 0.05)
#> Standardized regression slopes
#> type = "hc3"
#> est se R 2.5% 97.5%
#> NARTIC 0.4951 0.0795 20000 0.3231 0.6356
#> PCTGRT 0.3915 0.0826 20000 0.2186 0.5418
#> PCTSUPP 0.2632 0.0855 20000 0.0872 0.4263
#> NARTIC 0.4951 0.0800 20000 0.3227 0.6348
#> PCTGRT 0.3915 0.0826 20000 0.2192 0.5439
#> PCTSUPP 0.2632 0.0862 20000 0.0867 0.4267
```

### Other Effect Sizes
Expand All @@ -173,9 +173,9 @@ RSqMC(hc3, alpha = 0.05)
#>
#> R-squared and adjusted R-squared
#> type = "hc3"
#> est se R 2.5% 97.5%
#> rsq 0.8045 0.0618 20000 0.6472 0.888
#> adj 0.7906 0.0662 20000 0.6220 0.880
#> est se R 2.5% 97.5%
#> rsq 0.8045 0.0622 20000 0.6430 0.8876
#> adj 0.7906 0.0667 20000 0.6175 0.8796
```

#### Improvement in R-squared
Expand All @@ -188,9 +188,9 @@ DeltaRSqMC(hc3, alpha = 0.05)
#> Improvement in R-squared
#> type = "hc3"
#> est se R 2.5% 97.5%
#> NARTIC 0.1859 0.0687 20000 0.0515 0.3194
#> PCTGRT 0.1177 0.0548 20000 0.0255 0.2384
#> PCTSUPP 0.0569 0.0374 20000 0.0060 0.1507
#> NARTIC 0.1859 0.0691 20000 0.0498 0.3231
#> PCTGRT 0.1177 0.0549 20000 0.0250 0.2392
#> PCTSUPP 0.0569 0.0378 20000 0.0056 0.1514
```

#### Semipartial Correlation Coefficients
Expand All @@ -203,9 +203,9 @@ SCorMC(hc3, alpha = 0.05)
#> Semipartial correlations
#> type = "hc3"
#> est se R 2.5% 97.5%
#> NARTIC 0.4312 0.0864 20000 0.2270 0.5652
#> PCTGRT 0.3430 0.0834 20000 0.1596 0.4882
#> PCTSUPP 0.2385 0.0780 20000 0.0771 0.3882
#> NARTIC 0.4312 0.0871 20000 0.2231 0.5684
#> PCTGRT 0.3430 0.0834 20000 0.1581 0.4890
#> PCTSUPP 0.2385 0.0788 20000 0.0751 0.3891
```

#### Squared Partial Correlation Coefficients
Expand All @@ -218,9 +218,9 @@ PCorMC(hc3, alpha = 0.05)
#> Squared partial correlations
#> type = "hc3"
#> est se R 2.5% 97.5%
#> NARTIC 0.4874 0.1190 20000 0.1799 0.6503
#> PCTGRT 0.3757 0.1154 20000 0.1070 0.5544
#> PCTSUPP 0.2254 0.1131 20000 0.0246 0.4540
#> NARTIC 0.4874 0.1197 20000 0.1754 0.6491
#> PCTGRT 0.3757 0.1154 20000 0.1058 0.5558
#> PCTSUPP 0.2254 0.1134 20000 0.0234 0.4611
```

#### Differences of Standardized Regression Coefficients
Expand All @@ -233,9 +233,9 @@ DiffBetaMC(hc3, alpha = 0.05)
#> Differences of standardized regression slopes
#> type = "hc3"
#> est se R 2.5% 97.5%
#> NARTIC-PCTGRT 0.1037 0.1426 20000 -0.1795 0.3782
#> NARTIC-PCTSUPP 0.2319 0.1323 20000 -0.0355 0.4869
#> PCTGRT-PCTSUPP 0.1282 0.1379 20000 -0.1478 0.3941
#> NARTIC-PCTGRT 0.1037 0.1428 20000 -0.1856 0.3771
#> NARTIC-PCTSUPP 0.2319 0.1336 20000 -0.0382 0.4868
#> PCTGRT-PCTSUPP 0.1282 0.1383 20000 -0.1483 0.3938
```

## Documentation
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