Skip to content
Run tests

Change sed regex for version reporting in pigz modules #16476

Sign in to view logs

Change sed regex for version reporting in pigz modules

Change sed regex for version reporting in pigz modules #16476

Triggered via pull request October 30, 2024 09:31
@ljwharbersljwharbers
synchronize #6878
ljwharbers:master
Status Cancelled
Total duration 4m 0s
Artifacts –

test.yml

on: pull_request
nf-test-changes
53s
nf-test-changes
pytest-changes
7s
pytest-changes
prettier
33s
prettier
editorconfig
13s
editorconfig
pre-commit
1m 22s
pre-commit
Matrix: nf-test
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: pytest
confirm-pass
0s
confirm-pass
Fit to window
Zoom out
Zoom in

Annotations

36 errors and 2 warnings
nf-core-lint-modules (parabricks/fq2bam)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (parabricks/fq2bammeth)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (pigz/compress)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (pigz/uncompress)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (tcoffee/irmsd)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/mcstaging/phenoimager2mc, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (tcoffee/tcs)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/mcstaging/phenoimager2mc, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/pigz/uncompress, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/pigz/uncompress, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/tcoffee/tcs, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (svdb/merge)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/cellbender/removebackground, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/tcoffee/irmsd, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/tcoffee/irmsd, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/pigz/uncompress, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/cellbender/removebackground, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/cellbender/removebackground, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/pigz/compress, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/pigz/compress, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/svdb/merge, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/pigz/compress, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/svdb/merge, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/svdb/merge, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/tcoffee/irmsd, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (subworkflows/nf-core/fasta_newick_epang_gappa, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/tcoffee/tcs, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (subworkflows/nf-core/utils_nextflow_pipeline, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (modules/nf-core/tcoffee/tcs, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (subworkflows/nf-core/utils_nextflow_pipeline, conda)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (subworkflows/nf-core/fasta_newick_epang_gappa, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-test (subworkflows/nf-core/utils_nextflow_pipeline, singularity)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (cellbender/removebackground)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (cellbender/removebackground)
The operation was canceled.
nf-core-lint-modules (mcstaging/phenoimager2mc)
Canceling since a higher priority waiting request for 'Run tests-6878' exists
nf-core-lint-modules (mcstaging/phenoimager2mc)
The operation was canceled.
pytest-changes
The following actions use a deprecated Node.js version and will be forced to run on node20: mirpedrol/paths-filter@main. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.