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    215 repositories

    • containers

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •7•1•0•79•Updated Jan 6, 2025Jan 6, 2025

    • heal-data-commons

      Public
      TypeScript
      •
      Apache License 2.0
      •0•0•0•4•Updated Jan 6, 2025Jan 6, 2025

    • gen3-frontend-framework

      Public
      A Frontend Framework for Gen3 data portals
      TypeScript
      •
      Apache License 2.0
      •5•2•0•14•Updated Jan 6, 2025Jan 6, 2025

    • gitops-qa

      Public
      gen3-gitops
      HTML
      •
      Apache License 2.0
      •7•2•0•173•Updated Jan 6, 2025Jan 6, 2025

    • bdc-data-commons

      Public
      BDC using Gen 3.2
      TypeScript
      •
      Apache License 2.0
      •0•0•0•6•Updated Jan 6, 2025Jan 6, 2025

    • cloud-automation

      Public
      Automation for standing up Gen3 commons
      gen3
      Shell
      •
      Apache License 2.0
      •67•41•99•87•Updated Jan 6, 2025Jan 6, 2025

    • gen3-workflow

      Public
      Gen3 service for GA4GH TES integration
      Python
      •
      Apache License 2.0
      •0•1•0•2•Updated Jan 6, 2025Jan 6, 2025

    • gen3-spark

      Public
      gen3
      Dockerfile
      •
      Apache License 2.0
      •1•1•1•3•Updated Jan 6, 2025Jan 6, 2025

    • data-portal

      Public
      Windmill: data portal for metadata submission and query
      gen3
      JavaScript
      •
      Apache License 2.0
      •44•29•43•18•Updated Jan 6, 2025Jan 6, 2025

    • cdis-manifest

      Public
      Manifests tracking service versions to release to each environment
      HTML
      •
      Apache License 2.0
      •7•8•0•186•Updated Jan 6, 2025Jan 6, 2025

    • gen3-discovery-ai

      Public
      Gen3 Discovery AI
      Python
      •
      Apache License 2.0
      •0•1•0•13•Updated Jan 6, 2025Jan 6, 2025

    • canine-data-commons

      Public
      Gen3.2 web portal for caninedc.org
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•5•Updated Jan 4, 2025Jan 4, 2025

    • vadc-data-commons

      Public template
      VADC Gen3 Data Commons repository for gen3 frontend framework
      TypeScript
      •
      Apache License 2.0
      •15•0•0•2•Updated Jan 3, 2025Jan 3, 2025

    • fence

      Public
      AuthN/AuthZ OIDC Service
      gen3
      Python
      •
      Apache License 2.0
      •48•38•3•72•Updated Jan 3, 2025Jan 3, 2025

    • workspace-token-service

      Public
      gen3
      Python
      •
      Apache License 2.0
      •3•3•0•3•Updated Jan 3, 2025Jan 3, 2025

    • prometheus-data-platform

      Public template
      Gen3 based UI for Prometheus Data Platform
      TypeScript
      •
      Apache License 2.0
      •15•0•0•4•Updated Jan 3, 2025Jan 3, 2025

    • gen3-helm

      Public
      Helm charts for Gen3 Deployments
      Smarty
      •
      Apache License 2.0
      •24•9•5•15•Updated Jan 3, 2025Jan 3, 2025

    • gen3-qa

      Public
      Integration Tests for Gen3
      JavaScript
      •
      Apache License 2.0
      •4•6•2•16•Updated Jan 3, 2025Jan 3, 2025

    • pdp_dictionary

      Public
      The data dictionary for the Prometheus Data Platform (PDP).
      Python
      •
      Apache License 2.0
      •2•0•0•0•Updated Jan 2, 2025Jan 2, 2025

    • django-DefectDojo

      Public
      DevSecOps, ASPM, Vulnerability Management. All on one platform.
      HTML
      •
      BSD 3-Clause "New" or "Revised" License
      •1.6k•0•0•8•Updated Jan 2, 2025Jan 2, 2025

    • Atlas

      Public
      ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data
      JavaScript
      •
      Apache License 2.0
      •139•0•0•3•Updated Jan 2, 2025Jan 2, 2025

    • ibdgc-tools

      Public
      Python
      •
      Apache License 2.0
      •0•0•0•33•Updated Dec 28, 2024Dec 28, 2024

    • gen3-terraform

      Public
      HCL
      •
      Apache License 2.0
      •0•1•0•6•Updated Dec 27, 2024Dec 27, 2024

    • BRH-documentation

      Public
      Official Documentation of the BRH Data Mesh
      3•1•0•5•Updated Dec 26, 2024Dec 26, 2024

    • brh-data-commons

      Public
      Gen3.2 Data Commons for BRH
      TypeScript
      •
      Apache License 2.0
      •15•0•0•1•Updated Dec 24, 2024Dec 24, 2024

    • gen3-code-vigil

      Public
      Gen3 Testing
      Python
      •
      Apache License 2.0
      •2•2•0•6•Updated Dec 24, 2024Dec 24, 2024

    • thor

      Public
      Gen3 Release Orchestrator
      Python
      •3•0•1•4•Updated Dec 24, 2024Dec 24, 2024

    • google-bucket-manifest

      Public
      Repos to store CDIS Google dataflow templates
      Python
      •
      Apache License 2.0
      •0•0•0•73•Updated Dec 24, 2024Dec 24, 2024

    • cirrus

      Public
      Cloud Management Library (Wrapping Cloud APIs)
      gen3
      Python
      •
      Apache License 2.0
      •0•3•3•4•Updated Dec 24, 2024Dec 24, 2024

    • sheepdog

      Public
      API for herding data submissions
      gen3
      Python
      •
      Apache License 2.0
      •17•11•22•18•Updated Dec 24, 2024Dec 24, 2024